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Index >> Bacterial Recombination >> Models Of The Molecular Basis Of Generalised Recombination

Models Of The Molecular Basis Of Generalised Recombination

Models Of The Molecular Basis Of Generalised Recombination - The essential features of recombination are breakage and reunion of DNA. In prokaryotes reunion takes place by the formation of a heteroduplex joint. This is a form of molecular splicing in which each parent contributes one strand. One of the assumptions of recombina­tion is that homologous dsDNA molecules do not attract each other at specific points, i.e. there are no obvious forces of pairing. Another assumption is that hydrogen bond pairing between complementary regions of ssDNA is involved in recognition. 

Crossing-over by pairing between complementary single-stranded tails

A. According to this model recombination takes place between two 'homologous DNA molecules.

B. Single-stranded regions- are produced by an endonuclease which makes a cut in one strand of each DNA duplex

C. DNA polymerases can now act at the free ends and add new nucleotides. This results in the displacement of pre-existing strands, which form tails.

D. Random collision of single-stranded tails leads to base pairing by hydrogen bond formation between homologous regions. This results in the formation of a short double-stranded bridge.

E. The second strand of each DNA duplex now undergoes a nick (cut). This results in the formation of three fragments. Two are partial fragments one from each duplex, with overlapping terminal sequences. The third is a recombinant DNA molecule containing segments from each duplex, joined by the double-stranded bridge.

F. In the recombinant DNA molecule the missing portions are synthesized by DNA polymerase, and the gap filled.

G. The two strands are finally sealed with polynucleotide ligase, producing a double-stranded recombinant DNA molecule.

H. Exonuclease digestion of one strand of each partial fragment of (E) exposes complementary single-stranded regions.

I. Base pairing now takes place between the complementary regions. The gap is filled under the catalytic action of DNA polymerase, and the strands are finally sealed by ligase.

A. One strand of each DNA duplex undergoes a nuclease cut producing single stranded regions.

B. Exchange of strands between the two duplexes takes place a cross bridge.

C. The cross-bridge can diffuse by a zipper-like action (branch migration). Equivalent bases of the two original molecules exchange places.

D. Additional nuclease cut remove the cross-bridges. The subsequent gaps are closed by DNA polymerase and ligase action. The net result is double exchanges in two progeny strands and no exchange in two.

E. The parental strands can undergo 'isomerization' in which a steric rearrangement converts the bridging pair of strands into outside strands and vice versa.

F. Removal of cross-bridges by nuclease cuts and gap closure by DNA polymerase and ligase (as in D) results in single exchanges in all four progeny strands

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