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Index >> Cellular Components >> Genetic Code

Genetic Code

Genetic Code - Information flow in biological systems occurs from nucleic acids to proteins and' this conclusion has come largely from the work of George Beadle and Edward Tatum. Their early experiments with Neurospora led to the discovery that alteration in genetic structure by mutation leads to changes in the phenotypic characteristics and suggested that the primary action of each gene is to control the forma­tion of a protein.

On the basis of these experiments Beadle and Tatum proposed the famous "one gene-one enzyme" hypothesis. This has been now modified to "one gene-one polypeptide" hypothesis, after it became known that proteins or enzymes are generally aggregates of more than one kind of polypeptides. This hypothesis is correct to a very great extent and applies to all organisms. However, it is now known that certain genes also direct the formation of ribosomal and t-RNA molecules and not the formation of proteins.

It is also known that some regions of DNA may be transcribed but not used to synthesise peptides subsequently. Other than these excep­tions, the synthesis of a protein is through RNA molecules and this is what is now known as the central dogma (DNA -->RNA --> Protein).

Information regarding how DNA directs the synthesis of a protein has come from different investigators. Sanger and his colleagues in 1953, found that the sequence of amino acids in the insulin molecule from a variety of animals such as cattle, pig, sheep, and horse except for some minor amino acid replacements, was very similar. These minor changes were presumed to have arisen during the course of evolution by mutation without affecting the function of this molecule.

Comprehensive studies on the haemoglobin chains (Haemoglobin contains two identical α-chains and two β-chains) from normal and sickle cell anemia by Ingram and his colleagues in 1956 showed that the haemoglobin from patients with sickle cell anemia varied slightly from the normal haemoglobin and that the difference was due to a change in one amino acid in the β-chain.

This difference in function was concluded to be due to an alteration within a single gene. More direct evidence on the effect of mutation on the sequence of amino acids in a peptide came from the early work on tobacco mosaic virus. This virus consists of one type of protein and RNA. Wittman and others treated the virus with mutagens and isolated various mutants that had variations in the amino acid chain of the coat protein. Since it was by then well known that mutagens affect only nucleic acids, it was concluded that a mutation in the nucleic acid (RNA) had caused a change in the amino acid sequence of the peptide.

Strong evidence to support this line of thinking came from the laboratory of Charles Yanofsky. He and his coIleagues were studying the gene trp 5 in E. coli that controls the formation of the enzyme tryptophan synthetase. Their work showed that the position in which a number of different mutations occur along a gene are in the same  order as the positions in which the amino acid substitutions they produce along the peptide chain. This suggested that the gene and peptide are colinear.
Support to this also came from Seymour Benzer who showed that in the bacteriophage T2 a mutation is a consequence of a change in a segment of the DNA. All this meant that a change in nucleotide sequence of DNA results in a change in the amino acid sequence in a corresponding position along a peptide chain. Thus, it appeared that a group of nucleotides must be responsible for the insertion of one particular amino acid into the peptide.

As mentioned earlier, DNA is composed of two strands of poly nucleotides. Each polynucleotide contains only four bases while the peptides contain 20 amino acids. Logically, it would therefore be impossible for either one or two pairs of nucleotides to direct the incorporation of the 20 amino acids. This is because if one nucleotide directed the incorporation of one amino acid, then we would have seen peptides with only four amino acids. On the other hand, if two nucleotides directed the incorporation of one amino acid, only 16 amino acids should have been found (42= 16 pairs). This led to the suggestion that perhaps a triplet of nucleotides direct the 20 amino acids into the peptide chains because there can be 64 combinations (43=64), adequate enough to code for the 20 amino acids generally found in the proteins. The simplest coding ratio would therefore be a triplet nucleotides (three nucleoli des) for one amino acid. Evidence in support of this type of thinking accumulated from a variety of experiments carried out by Crick, Benzer, Nirenberg, Khorana and others and it was soon concluded that a set of three nucleotides direct the insertion of one amino acid into the peptide.

As early as in the fifties, it was known that most proteins are synthesized in the cytoplasm while DNA exists in the nucleus. Because proteins are synthesised on the ribosomes rather than on the genes, it was presumed that some kind of intermediate of the gene directs the assembly of the amino acids into proteins. Since nearly two ­thirds the weight of ribosomes was RNA and proteins were established not to be the genetic material, it was suggested that perhaps, RNA found. in the ribosomes carries an imprint of the gene. If that were so, the sequence of this RNA should have a direct, relationship to the sequence of DNA from where it was copied. This theory was vigorously tested using cell free bacterial systems. However, it was found that the RNA found in the ribosomes had no ability to direct peptide synthesis.
In 1957, E.Volkin and L. Astrachan reported that in E. coli the RNA formed soon after infection with either T2 or T7 bacterio­phages, had a sequence complimentary to the DNA sequence of the bacteriophage. The RNA synthesized after infection was isolated and was found to hybridize with only one DNA strand of the bacteriophage. It was concluded that an intermediary type of RNA called the m-RNA (messenger RNA) is formed on only one strand of the DNA. The m-RNA after synthesis associates with the ribosomes and other factors and allows peptide synthesis.

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