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Regulation of Enzyme Activity

Regulation of Enzyme Activity - As described other topics, the catalytic activity of many proteins is affected by their binding to specific small molecules. In this way, the activity of enzymes can be reduced when they are not required. Several enzymes are known whose activity can be inhibited by end products and classical examples arc aspartokinase, and aspartate transcarbamylase which are the first enzymes in the purine or pyrimidine biosynthetic pathways. In these, the final step in the synthesis of an end product is separated by several intermediate metabolic steps.

This specific inhibition by the end product is called feed back of end product inhibition. The exact mechanism of inhibition involves the binding of the end product to the enzyme, causing a structural change (allosteric transformation) and preventing the enzyme from binding to the substrate.

Many biosynthetic pathways have two or more end products. Feedback inhibition in such pathways ,is much more complex than in un branched pathways.  In a branched pathway leading to the synthesis of more than one product, complete feedback inhibition by anyone of the end products will lead to cessation of growth.

To avoid this, microorganisms have evolved a mechanism by which feedback inhibition, by the end product of a branched biosynthetic pathway, is exerted specifically on the enzyme that catalyses the initial step following the branch point thus allowing synthesis of the other end products

Today, fit least five different types of feedback mechanisms are known to exist: (i)

When the cell synthesises two enzymes (isozymes) that catalyse the first reaction, the extent of feedback inhibition by the end products will vary.When neither the end product is present the combined activity of two enzymes is adequate to produce sufficient quantities of the intermediates to meet the cellular demands for the synthesis of both the end products. When both the end products are present, the two isozymes are inhibited and the pathway ceases to function

(ii) In, case the synthesis of two end products is catalysed by one enzyme, it has been found that such an enzyme possesses two allosteric sites each of which can be bound by one of the specific end products.

Complete inactivation of enzyme occurs only when both the effectors (end products) are bound to the enzyme and enzyme activity is not affected by the binding of only one effector. This type of control is termed as concerted feedback inhibition and prevents the operation of the pathway only when both the end products are present

(iii) The third mechanism of feedback inhibition is the sequential feedback. In this, the enzyme subject to inhibition is not inhibited by the end product of the pathway but an intermediate immediately preceding the branch point.

A high concentration of the product inhibits the enzymes succeeding the branch point and leads to the accumulation of the intermediates before this point. An increased concentration of the intermediates in turn inhibits the activity of the first enzyme

(iv) In certain branched pathways, the first enzyme is an allosteric enzyme with different effector sites for the end products. Each end product therefore causes only a partial inhibition of the enzyme and the inhibitory effect is additive. Such control is known as cumulative feedback inhibition. These types of regulatory controls have been well demonstrated in the biosynthesis of amino acids in bacteria

(v) A fifth mechanism which is different from those described above is where a biosynthetic intermediate enters two independent pathways, one product serves as an activator while the other as an inhibitor. For example, carbamylphosphate synthetase is allosterically inhibited by UMP, an intermediate of the pyrimidine pathway, while it is activated by ornithine which is an intermediate of the arginine pathway. In the presence of excess pyrimidines the concentration of UMP increases leading to the inhibition of carbamylphosphate synthetase. The resulting decrease in carbamylphosphate concentration allows ornithine to accumulate which in turn activates carbamylphosphate synthetase so that sufficient carbamylphosphate is available for the synthesis of the alternate end product namely arginine. If arginine is available in the medium, the biosynthesis of ornithine is prevented. Thus, a variety of mechanisms that regulate synthesis by feedback inhibition are known and all regulatory mechanisms are mediated through allosteric proteins, whose activity is altered by the binding of small molecules. With a few exceptions, the biosynthetic pathways in all microorganisms are similar; however, a given pathway in different organisms may be subject to different modes of regulation. Secondly, the synthesis of an enzyme may be both repressed as well as inhibited by the end product.

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