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Nitrogen Assimilation

Nitrogen Assimilation -

The essential requirement for growth in all organisms is the assimilation of nitrogen into molecules. Nitrogen metabolism pathways are of two classes:

(i) Assimilatory pathways which are necessary for the utilization of nitrogen from available compounds in the medium. These pathways are involved in the formation of glutamate, glutamine and asparagine.

(ii) Biosynthetic pathways with lead to the production nitrogen-containing compounds of the cell. Glutamate and glutamine serve as nitrogen donors for biosynthetic reactions in virtually all cells. Included in the biosynthetic pathways are the pathways leading to the formation of amino acids. These have been described separately in the chapter "Biosynthesis of Amino Acid".

The enzymes involved in nitrogen assimilation are:
(i) glutamate dehydrogenase (GDH),
(ii) glutamate synthase (GOGAT)
(iii) glutamine synthase (GS) and
(iv) transaminase.

The pathways of glutamate and glutamine synthesis depend upon the concentration of NH3 in the cell. At high NH3concentration,the synthesis of these two compounds takes place by two sequential reactions catalyzed by GDH and GS.

GDH is not in the major pathway of glutamate metabolism. The affinity of GDH for NH3 is relatively low. The enzyme does not function effectively at low NH3, Concentrations. Under these conditions the induction of GOGAT takes place and this enzyme catalysis the reaction. The major route of NH3 assimilation becomes the GS reaction.

Glutamate can be produced by a variety of reactions in enteric bacteria. There are three main classes of reactions according to the immediate origin of N and C atoms.

(i) From ammonia and 2-oxoglutarate, either by (a) the reaction catalyzed by GDH, or by (b) the coupled reaction catalyzed by GS and GOGA T.

(ii) From C and N atoms of another ammonia acid by its degradation.

(iii) From the amino group of another amino acid and 2­ Oxoglutarate by transamination.

 

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